struct
Statistics in R Using Class-based Templates
Bioconductor version: Release (3.20)
Defines and includes a set of class-based templates for developing and implementing data processing and analysis workflows, with a strong emphasis on statistics and machine learning. The templates can be used and where needed extended to 'wrap' tools and methods from other packages into a common standardised structure to allow for effective and fast integration. Model objects can be combined into sequences, and sequences nested in iterators using overloaded operators to simplify and improve readability of the code. Ontology lookup has been integrated and implemented to provide standardised definitions for methods, inputs and outputs wrapped using the class-based templates.
Author: Gavin Rhys Lloyd [aut, cre], Ralf Johannes Maria Weber [aut]
Maintainer: Gavin Rhys Lloyd <g.r.lloyd at bham.ac.uk>
citation("struct")):
Installation
To install this package, start R (version "4.4") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("struct")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("struct")| Introduction to STRUCT - STatistics in R using Class-based Templates | HTML | R Script |
| Reference Manual | ||
| NEWS | Text |
Details
| biocViews | Software, WorkflowStep |
| Version | 1.18.0 |
| In Bioconductor since | BioC 3.11 (R-4.0) (4.5 years) |
| License | GPL-3 |
| Depends | R (>= 4.0) |
| Imports | methods, ontologyIndex, datasets, graphics, stats, utils, knitr, SummarizedExperiment, S4Vectors, rols |
| System Requirements | |
| URL |
See More
| Suggests | testthat, rstudioapi, rmarkdown, covr, BiocStyle, openxlsx, ggplot2, magick |
| Linking To | |
| Enhances | |
| Depends On Me | MetMashR, structToolbox |
| Imports Me | metabolomicsWorkbenchR |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | struct_1.18.0.tar.gz |
| Windows Binary (x86_64) | struct_1.18.0.zip |
| macOS Binary (x86_64) | struct_1.18.0.tgz |
| macOS Binary (arm64) | struct_1.18.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/struct |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/struct |
| Bioc Package Browser | https://code.bioconductor.org/browse/struct/ |
| Package Short Url | https://bioconductor.org/packages/struct/ |
| Package Downloads Report | Download Stats |