| See download stats for: Bioconductor software packages Bioconductor experiment packages Bioconductor workflow packages |
Data as of Mon. 02 Nov 2026.
The number reported next to each package name is the download score, that is, the average number of distinct IPs that "hit" the package each month for the last 12 months (not counting the current month).
All annotation package stats in one file: annotation_pkg_stats.tab
All annotation download scores in one file: annotation_pkg_scores.tab
See Download stats for Bioconductor annotation repository (all packages combined)
BSgenome.Amellifera.BeeBase.assembly4 (132)
BSgenome.Amellifera.NCBI.AmelHAv3.1 (76)
BSgenome.Amellifera.UCSC.apiMel2 (139)
BSgenome.Amellifera.UCSC.apiMel2.masked (128)
BSgenome.Aofficinalis.NCBI.V1 (78)
BSgenome.Athaliana.TAIR.01222004 (13)
BSgenome.Athaliana.TAIR.04232008 (142)
BSgenome.Athaliana.TAIR.TAIR9 (198)
BSgenome.Btaurus.UCSC.bosTau3 (160)
BSgenome.Btaurus.UCSC.bosTau3.masked (109)
BSgenome.Btaurus.UCSC.bosTau4 (148)
BSgenome.Btaurus.UCSC.bosTau4.masked (108)
BSgenome.Btaurus.UCSC.bosTau6 (137)
BSgenome.Btaurus.UCSC.bosTau6.masked (116)
BSgenome.Btaurus.UCSC.bosTau8 (112)
BSgenome.Btaurus.UCSC.bosTau9 (98)
BSgenome.Btaurus.UCSC.bosTau9.masked (74)
BSgenome.Carietinum.NCBI.v1 (83)
BSgenome.Celegans.UCSC.ce10 (224)
BSgenome.Celegans.UCSC.ce11 (477)
BSgenome.Celegans.UCSC.ce2 (906)
BSgenome.Celegans.UCSC.ce6 (144)
BSgenome.Cfamiliaris.UCSC.canFam2 (160)
BSgenome.Cfamiliaris.UCSC.canFam2.masked (102)
BSgenome.Cfamiliaris.UCSC.canFam3 (171)
BSgenome.Cfamiliaris.UCSC.canFam3.masked (109)
BSgenome.Cjacchus.UCSC.calJac3 (75)
BSgenome.Cjacchus.UCSC.calJac4 (73)
BSgenome.CneoformansVarGrubiiKN99.NCBI.ASM221672v1 (96)
BSgenome.Creinhardtii.JGI.v5.6 (78)
BSgenome.Dmelanogaster.BDGP.Release5 (3)
BSgenome.Dmelanogaster.FlyBase.r51 (7)
BSgenome.Dmelanogaster.UCSC.dm2 (163)
BSgenome.Dmelanogaster.UCSC.dm2.masked (112)
BSgenome.Dmelanogaster.UCSC.dm3 (766)
BSgenome.Dmelanogaster.UCSC.dm3.masked (122)
BSgenome.Dmelanogaster.UCSC.dm6 (230)
BSgenome.Drerio.UCSC.danRer10 (160)
BSgenome.Drerio.UCSC.danRer11 (155)
BSgenome.Drerio.UCSC.danRer5 (140)
BSgenome.Drerio.UCSC.danRer6.masked (105)
BSgenome.Drerio.UCSC.danRer7 (267)
BSgenome.Drerio.UCSC.danRer7.masked (112)
BSgenome.Dvirilis.Ensembl.dvircaf1 (75)
BSgenome.Ecoli.NCBI.20080805 (283)
BSgenome.Gaculeatus.UCSC.gasAcu1 (134)
BSgenome.Gaculeatus.UCSC.gasAcu1.masked (122)
BSgenome.Ggallus.UCSC.galGal3 (195)
BSgenome.Ggallus.UCSC.galGal3.masked (139)
BSgenome.Ggallus.UCSC.galGal4 (140)
BSgenome.Ggallus.UCSC.galGal4.masked (131)
BSgenome.Ggallus.UCSC.galGal5 (88)
BSgenome.Ggallus.UCSC.galGal6 (91)
BSgenome.Hsapiens.1000genomes.hs37d5 (424)
BSgenome.Hsapiens.NCBI.b36v3 (4)
BSgenome.Hsapiens.NCBI.GRCh38 (908)
BSgenome.Hsapiens.NCBI.T2T.CHM13v2.0 (87)
BSgenome.Hsapiens.UCSC.hg16 (7)
BSgenome.Hsapiens.UCSC.hg17 (164)
BSgenome.Hsapiens.UCSC.hg17.masked (105)
BSgenome.Hsapiens.UCSC.hg18 (777)
BSgenome.Hsapiens.UCSC.hg18.masked (125)
BSgenome.Hsapiens.UCSC.hg19 (2440)
BSgenome.Hsapiens.UCSC.hg19.masked (412)
BSgenome.Hsapiens.UCSC.hg38 (4450)
BSgenome.Hsapiens.UCSC.hg38.dbSNP151.major (81)
BSgenome.Hsapiens.UCSC.hg38.dbSNP151.minor (80)
BSgenome.Hsapiens.UCSC.hg38.masked (423)
BSgenome.Hsapiens.UCSC.hs1 (80)
BSgenome.Mdomestica.UCSC.monDom5 (81)
BSgenome.Mfascicularis.NCBI.5.0 (92)
BSgenome.Mfascicularis.NCBI.6.0 (77)
BSgenome.Mfuro.UCSC.musFur1 (97)
BSgenome.Mmulatta.UCSC.rheMac10 (103)
BSgenome.Mmulatta.UCSC.rheMac2 (131)
BSgenome.Mmulatta.UCSC.rheMac2.masked (105)
BSgenome.Mmulatta.UCSC.rheMac3 (118)
BSgenome.Mmulatta.UCSC.rheMac3.masked (105)
BSgenome.Mmulatta.UCSC.rheMac8 (90)
BSgenome.Mmusculus.UCSC.mm10 (1924)
BSgenome.Mmusculus.UCSC.mm10.masked (129)
BSgenome.Mmusculus.UCSC.mm39 (608)
BSgenome.Mmusculus.UCSC.mm6 (4)
BSgenome.Mmusculus.UCSC.mm7 (8)
BSgenome.Mmusculus.UCSC.mm8 (161)
BSgenome.Mmusculus.UCSC.mm8.masked (119)
BSgenome.Mmusculus.UCSC.mm9 (328)
BSgenome.Ppaniscus.UCSC.panPan1 (73)
BSgenome.Ppaniscus.UCSC.panPan2 (73)
BSgenome.Ptroglodytes.UCSC.panTro2 (148)
BSgenome.Ptroglodytes.UCSC.panTro2.masked (109)
BSgenome.Ptroglodytes.UCSC.panTro3 (127)
BSgenome.Ptroglodytes.UCSC.panTro3.masked (106)
BSgenome.Ptroglodytes.UCSC.panTro5 (85)
BSgenome.Ptroglodytes.UCSC.panTro6 (81)
BSgenome.Rnorvegicus.UCSC.rn4 (175)
BSgenome.Rnorvegicus.UCSC.rn4.masked (107)
BSgenome.Rnorvegicus.UCSC.rn5 (395)
BSgenome.Rnorvegicus.UCSC.rn5.masked (111)
BSgenome.Rnorvegicus.UCSC.rn6 (422)
BSgenome.Rnorvegicus.UCSC.rn7 (104)
BSgenome.Scerevisiae.UCSC.sacCer1 (445)
BSgenome.Scerevisiae.UCSC.sacCer2 (759)
BSgenome.Scerevisiae.UCSC.sacCer3 (381)
BSgenome.Sscrofa.UCSC.susScr11 (98)
BSgenome.Sscrofa.UCSC.susScr3 (114)
BSgenome.Sscrofa.UCSC.susScr3.masked (104)
BSgenome.Tgondii.ToxoDB.7.0 (121)
BSgenome.Tguttata.UCSC.taeGut1 (103)
BSgenome.Tguttata.UCSC.taeGut1.masked (110)
BSgenome.Tguttata.UCSC.taeGut2 (85)
BSgenome.Vvinifera.URGI.IGGP12Xv0 (87)
BSgenome.Vvinifera.URGI.IGGP12Xv2 (90)
clariomdhumanprobeset.db (134)
clariomdhumantranscriptcluster.db (278)
clariomshumanhttranscriptcluster.db (147)
clariomshumantranscriptcluster.db (255)
clariomsmousehttranscriptcluster.db (130)
clariomsmousetranscriptcluster.db (190)
clariomsrathttranscriptcluster.db (113)
HsAgilentDesign026652.db (215)
hta20sttranscriptcluster.db (26)
hta20transcriptcluster.db (441)
huex10sttranscriptcluster.db (306)
HuExExonProbesetLocation (127)
HuExExonProbesetLocationHg18 (134)
HuExExonProbesetLocationHg19 (133)
hugene10sttranscriptcluster.db (1077)
hugene11sttranscriptcluster.db (336)
hugene20sttranscriptcluster.db (493)
hugene21sttranscriptcluster.db (319)
illuminaHumanDASLBeadID.db (18)
IlluminaHumanMethylation27k.db (204)
IlluminaHumanMethylation27kanno.ilmn12.hg19 (226)
IlluminaHumanMethylation27kmanifest (150)
IlluminaHumanMethylation450k.db (97)
IlluminaHumanMethylation450kanno.ilmn12.hg19 (2374)
IlluminaHumanMethylation450kannotation.ilmn.v1.2 (11)
IlluminaHumanMethylation450kmanifest (1483)
IlluminaHumanMethylation450kprobe (139)
IlluminaHumanMethylationEPICanno.ilm10b2.hg19 (380)
IlluminaHumanMethylationEPICanno.ilm10b3.hg19 (86)
IlluminaHumanMethylationEPICanno.ilm10b4.hg19 (1452)
IlluminaHumanMethylationEPICmanifest (1262)
IlluminaHumanMethylationEPICv2anno.20a1.hg38 (969)
IlluminaHumanMethylationEPICv2manifest (920)
IlluminaHumanMethylationMSAanno.ilm10a1.hg38 (77)
MafDb.1Kgenomes.phase1.GRCh38 (111)
MafDb.1Kgenomes.phase1.hs37d5 (145)
MafDb.1Kgenomes.phase3.GRCh38 (125)
MafDb.1Kgenomes.phase3.hs37d5 (143)
MafDb.ALL.wgs.phase1.release.v3.20101123 (46)
MafDb.ALL.wgs.phase3.release.v5a.20130502 (6)
MafDb.ALL.wgs.phase3.release.v5b.20130502 (6)
MafDb.ESP6500SI.V2.SSA137 (21)
MafDb.ESP6500SI.V2.SSA137.dbSNP138 (19)
MafDb.ESP6500SI.V2.SSA137.GRCh38 (27)
MafDb.ESP6500SI.V2.SSA137.hs37d5 (24)
MafDb.ExAC.r0.3.1.nonTCGA.snvs.hs37d5 (8)
MafDb.ExAC.r0.3.1.snvs.hs37d5 (9)
MafDb.ExAC.r1.0.nonTCGA.GRCh38 (107)
MafDb.ExAC.r1.0.nonTCGA.hs37d5 (145)
MafDb.gnomAD.r2.0.1.GRCh38 (18)
MafDb.gnomAD.r2.0.1.hs37d5 (14)
MafDb.gnomAD.r2.1.GRCh38 (112)
MafDb.gnomAD.r2.1.hs37d5 (115)
MafDb.gnomADex.r2.0.1.GRCh38 (17)
MafDb.gnomADex.r2.0.1.hs37d5 (27)
MafDb.gnomADex.r2.1.GRCh38 (105)
MafDb.gnomADex.r2.1.hs37d5 (109)
MafDb.TOPMed.freeze5.hg19 (114)
MafDb.TOPMed.freeze5.hg38 (109)
MafH5.gnomAD.v3.1.1.GRCh38 (19)
MafH5.gnomAD.v3.1.2.GRCh38 (21)
mamurhesusmamuentrezgprobe (3)
Masks.Dmelanogaster.UCSC.dm3 (9)
MeSH.Eco.K12.MG1655.eg.db (36)
MeSH.Eco.O127.H6.E2348.69.eg.db (9)
MeSH.Eco.O157.H7.EDL933.eg.db (11)
MeSH.Eco.O157.H7.Sakai.eg.db (31)
MmAgilentDesign026655.db (179)
moex10sttranscriptcluster.db (221)
MoExExonProbesetLocation (197)
mogene10sttranscriptcluster.db (319)
mogene11sttranscriptcluster.db (214)
mogene20sttranscriptcluster.db (265)
mogene21sttranscriptcluster.db (197)
mta10sttranscriptcluster.db (23)
org.MeSH.Eco.K12.DH10B.db (20)
org.MeSH.Eco.K12.MG1655.db (22)
org.MeSH.Eco.O103.H2.12009.db (18)
org.MeSH.Eco.O111.H.11128.db (19)
org.MeSH.Eco.O127.H6.E2348.69.db (20)
org.MeSH.Eco.O157.H7.EC4115.db (19)
org.MeSH.Eco.O157.H7.EDL933.db (20)
org.MeSH.Eco.O157.H7.Sakai.db (23)
org.MeSH.Eco.O157.H7.TW14359.db (17)
org.MeSH.Eco.O26.H11.11368.db (16)
pd.081229.hg18.promoter.medip.hx1 (161)
pd.2006.07.18.hg18.refseq.promoter (206)
pd.2006.07.18.mm8.refseq.promoter (170)
raex10sttranscriptcluster.db (124)
RaExExonProbesetLocation (189)
ragene10sttranscriptcluster.db (188)
ragene11sttranscriptcluster.db (199)
ragene20sttranscriptcluster.db (169)
ragene21sttranscriptcluster.db (165)
SNPlocs.Hsapiens.dbSNP.20071016 (16)
SNPlocs.Hsapiens.dbSNP.20080617 (15)
SNPlocs.Hsapiens.dbSNP.20090506 (66)
SNPlocs.Hsapiens.dbSNP.20100427 (68)
SNPlocs.Hsapiens.dbSNP.20101109 (345)
SNPlocs.Hsapiens.dbSNP.20110815 (69)
SNPlocs.Hsapiens.dbSNP.20111119 (57)
SNPlocs.Hsapiens.dbSNP.20120608 (83)
SNPlocs.Hsapiens.dbSNP141.GRCh38 (50)
SNPlocs.Hsapiens.dbSNP142.GRCh37 (61)
SNPlocs.Hsapiens.dbSNP144.GRCh37 (436)
SNPlocs.Hsapiens.dbSNP144.GRCh38 (568)
TxDb.Athaliana.BioMart.plantsmart10 (43)
TxDb.Athaliana.BioMart.plantsmart12 (45)
TxDb.Athaliana.BioMart.plantsmart14 (35)
TxDb.Athaliana.BioMart.plantsmart16 (33)
TxDb.Athaliana.BioMart.plantsmart19 (18)
TxDb.Athaliana.BioMart.plantsmart21 (13)
TxDb.Athaliana.BioMart.plantsmart22 (645)
TxDb.Athaliana.BioMart.plantsmart25 (174)
TxDb.Athaliana.BioMart.plantsmart28 (244)
TxDb.Athaliana.BioMart.plantsmart51 (117)
TxDb.Celegans.UCSC.ce11.ensGene (492)
TxDb.Celegans.UCSC.ce11.refGene (190)
TxDb.Celegans.UCSC.ce6.ensGene (358)
TxDb.Cfamiliaris.UCSC.canFam3.refGene (121)
TxDb.Cfamiliaris.UCSC.canFam4.refGene (95)
TxDb.Cfamiliaris.UCSC.canFam5.refGene (83)
TxDb.Cfamiliaris.UCSC.canFam6.refGene (84)
TxDb.Dmelanogaster.UCSC.dm3.ensGene (993)
TxDb.Dmelanogaster.UCSC.dm6.ensGene (290)
TxDb.Drerio.UCSC.danRer10.refGene (207)
TxDb.Drerio.UCSC.danRer11.refGene (161)
TxDb.Ggallus.UCSC.galGal4.refGene (136)
TxDb.Ggallus.UCSC.galGal5.refGene (150)
TxDb.Ggallus.UCSC.galGal6.refGene (116)
TxDb.Hsapiens.BioMart.igis (120)
TxDb.Hsapiens.UCSC.hg18.knownGene (718)
TxDb.Hsapiens.UCSC.hg19.knownGene (5415)
TxDb.Hsapiens.UCSC.hg19.lincRNAsTranscripts (508)
TxDb.Hsapiens.UCSC.hg19.refGene (97)
TxDb.Hsapiens.UCSC.hg38.knownGene (3457)
TxDb.Mmulatta.UCSC.rheMac3.refGene (126)
TxDb.Mmulatta.UCSC.rheMac8.refGene (137)
TxDb.Mmusculus.UCSC.mm10.ensGene (251)
TxDb.Mmusculus.UCSC.mm10.knownGene (1907)
TxDb.Mmusculus.UCSC.mm39.knownGene (285)
TxDb.Mmusculus.UCSC.mm39.refGene (175)
TxDb.Mmusculus.UCSC.mm9.knownGene (769)
TxDb.Ptroglodytes.UCSC.panTro4.refGene (124)
TxDb.Ptroglodytes.UCSC.panTro5.refGene (103)
TxDb.Ptroglodytes.UCSC.panTro6.refGene (99)
TxDb.Rnorvegicus.BioMart.igis (109)
TxDb.Rnorvegicus.UCSC.rn4.ensGene (315)
TxDb.Rnorvegicus.UCSC.rn5.refGene (447)
TxDb.Rnorvegicus.UCSC.rn6.ncbiRefSeq (80)
TxDb.Rnorvegicus.UCSC.rn6.refGene (236)
TxDb.Rnorvegicus.UCSC.rn7.refGene (141)
TxDb.Scerevisiae.UCSC.sacCer2.ensGene (4)
TxDb.Scerevisiae.UCSC.sacCer2.sgdGene (145)
TxDb.Scerevisiae.UCSC.sacCer3.sgdGene (261)