| See download stats for: Bioconductor software packages Bioconductor experiment packages Bioconductor workflow packages |
Data as of Tue. 01 Sep 2026.
The number reported next to each package name is the download score, that is, the average number of distinct IPs that "hit" the package each month for the last 12 months (not counting the current month).
All annotation package stats in one file: annotation_pkg_stats.tab
All annotation download scores in one file: annotation_pkg_scores.tab
See Download stats for Bioconductor annotation repository (all packages combined)
BSgenome.Amellifera.BeeBase.assembly4 (96)
BSgenome.Amellifera.NCBI.AmelHAv3.1 (48)
BSgenome.Amellifera.UCSC.apiMel2 (101)
BSgenome.Amellifera.UCSC.apiMel2.masked (88)
BSgenome.Aofficinalis.NCBI.V1 (49)
BSgenome.Athaliana.TAIR.01222004 (8)
BSgenome.Athaliana.TAIR.04232008 (105)
BSgenome.Athaliana.TAIR.TAIR9 (188)
BSgenome.Btaurus.UCSC.bosTau3 (118)
BSgenome.Btaurus.UCSC.bosTau3.masked (74)
BSgenome.Btaurus.UCSC.bosTau4 (108)
BSgenome.Btaurus.UCSC.bosTau4.masked (74)
BSgenome.Btaurus.UCSC.bosTau6 (99)
BSgenome.Btaurus.UCSC.bosTau6.masked (81)
BSgenome.Btaurus.UCSC.bosTau8 (81)
BSgenome.Btaurus.UCSC.bosTau9 (80)
BSgenome.Btaurus.UCSC.bosTau9.masked (44)
BSgenome.Carietinum.NCBI.v1 (50)
BSgenome.Celegans.UCSC.ce10 (196)
BSgenome.Celegans.UCSC.ce11 (469)
BSgenome.Celegans.UCSC.ce2 (937)
BSgenome.Celegans.UCSC.ce6 (104)
BSgenome.Cfamiliaris.UCSC.canFam2 (122)
BSgenome.Cfamiliaris.UCSC.canFam2.masked (69)
BSgenome.Cfamiliaris.UCSC.canFam3 (137)
BSgenome.Cfamiliaris.UCSC.canFam3.masked (73)
BSgenome.Cjacchus.UCSC.calJac3 (49)
BSgenome.Cjacchus.UCSC.calJac4 (46)
BSgenome.CneoformansVarGrubiiKN99.NCBI.ASM221672v1 (57)
BSgenome.Creinhardtii.JGI.v5.6 (50)
BSgenome.Dmelanogaster.BDGP.Release5 (2)
BSgenome.Dmelanogaster.FlyBase.r51 (5)
BSgenome.Dmelanogaster.UCSC.dm2 (129)
BSgenome.Dmelanogaster.UCSC.dm2.masked (76)
BSgenome.Dmelanogaster.UCSC.dm3 (780)
BSgenome.Dmelanogaster.UCSC.dm3.masked (84)
BSgenome.Dmelanogaster.UCSC.dm6 (227)
BSgenome.Drerio.UCSC.danRer10 (134)
BSgenome.Drerio.UCSC.danRer11 (137)
BSgenome.Drerio.UCSC.danRer5 (103)
BSgenome.Drerio.UCSC.danRer6.masked (72)
BSgenome.Drerio.UCSC.danRer7 (250)
BSgenome.Drerio.UCSC.danRer7.masked (76)
BSgenome.Dvirilis.Ensembl.dvircaf1 (45)
BSgenome.Ecoli.NCBI.20080805 (275)
BSgenome.Gaculeatus.UCSC.gasAcu1 (96)
BSgenome.Gaculeatus.UCSC.gasAcu1.masked (84)
BSgenome.Ggallus.UCSC.galGal3 (158)
BSgenome.Ggallus.UCSC.galGal3.masked (93)
BSgenome.Ggallus.UCSC.galGal4 (98)
BSgenome.Ggallus.UCSC.galGal4.masked (88)
BSgenome.Ggallus.UCSC.galGal5 (57)
BSgenome.Ggallus.UCSC.galGal6 (67)
BSgenome.Hsapiens.1000genomes.hs37d5 (475)
BSgenome.Hsapiens.NCBI.b36v3 (3)
BSgenome.Hsapiens.NCBI.GRCh38 (962)
BSgenome.Hsapiens.NCBI.T2T.CHM13v2.0 (64)
BSgenome.Hsapiens.UCSC.hg16 (7)
BSgenome.Hsapiens.UCSC.hg17 (123)
BSgenome.Hsapiens.UCSC.hg17.masked (69)
BSgenome.Hsapiens.UCSC.hg18 (791)
BSgenome.Hsapiens.UCSC.hg18.masked (90)
BSgenome.Hsapiens.UCSC.hg19 (2638)
BSgenome.Hsapiens.UCSC.hg19.masked (403)
BSgenome.Hsapiens.UCSC.hg38 (4836)
BSgenome.Hsapiens.UCSC.hg38.dbSNP151.major (71)
BSgenome.Hsapiens.UCSC.hg38.dbSNP151.minor (69)
BSgenome.Hsapiens.UCSC.hg38.masked (432)
BSgenome.Hsapiens.UCSC.hs1 (55)
BSgenome.Mdomestica.UCSC.monDom5 (52)
BSgenome.Mfascicularis.NCBI.5.0 (78)
BSgenome.Mfascicularis.NCBI.6.0 (50)
BSgenome.Mfuro.UCSC.musFur1 (67)
BSgenome.Mmulatta.UCSC.rheMac10 (79)
BSgenome.Mmulatta.UCSC.rheMac2 (96)
BSgenome.Mmulatta.UCSC.rheMac2.masked (71)
BSgenome.Mmulatta.UCSC.rheMac3 (81)
BSgenome.Mmulatta.UCSC.rheMac3.masked (70)
BSgenome.Mmulatta.UCSC.rheMac8 (62)
BSgenome.Mmusculus.UCSC.mm10 (2069)
BSgenome.Mmusculus.UCSC.mm10.masked (97)
BSgenome.Mmusculus.UCSC.mm39 (661)
BSgenome.Mmusculus.UCSC.mm6 (3)
BSgenome.Mmusculus.UCSC.mm7 (7)
BSgenome.Mmusculus.UCSC.mm8 (121)
BSgenome.Mmusculus.UCSC.mm8.masked (85)
BSgenome.Mmusculus.UCSC.mm9 (327)
BSgenome.Ppaniscus.UCSC.panPan1 (46)
BSgenome.Ppaniscus.UCSC.panPan2 (46)
BSgenome.Ptroglodytes.UCSC.panTro2 (105)
BSgenome.Ptroglodytes.UCSC.panTro2.masked (77)
BSgenome.Ptroglodytes.UCSC.panTro3 (91)
BSgenome.Ptroglodytes.UCSC.panTro3.masked (69)
BSgenome.Ptroglodytes.UCSC.panTro5 (57)
BSgenome.Ptroglodytes.UCSC.panTro6 (54)
BSgenome.Rnorvegicus.UCSC.rn4 (138)
BSgenome.Rnorvegicus.UCSC.rn4.masked (73)
BSgenome.Rnorvegicus.UCSC.rn5 (397)
BSgenome.Rnorvegicus.UCSC.rn5.masked (75)
BSgenome.Rnorvegicus.UCSC.rn6 (469)
BSgenome.Rnorvegicus.UCSC.rn7 (76)
BSgenome.Scerevisiae.UCSC.sacCer1 (431)
BSgenome.Scerevisiae.UCSC.sacCer2 (778)
BSgenome.Scerevisiae.UCSC.sacCer3 (360)
BSgenome.Sscrofa.UCSC.susScr11 (70)
BSgenome.Sscrofa.UCSC.susScr3 (85)
BSgenome.Sscrofa.UCSC.susScr3.masked (71)
BSgenome.Tgondii.ToxoDB.7.0 (84)
BSgenome.Tguttata.UCSC.taeGut1 (72)
BSgenome.Tguttata.UCSC.taeGut1.masked (77)
BSgenome.Tguttata.UCSC.taeGut2 (57)
BSgenome.Vvinifera.URGI.IGGP12Xv0 (57)
BSgenome.Vvinifera.URGI.IGGP12Xv2 (61)
HsAgilentDesign026652.db (164)
hta20sttranscriptcluster.db (15)
hta20transcriptcluster.db (338)
huex10sttranscriptcluster.db (238)
HuExExonProbesetLocationHg18 (96)
HuExExonProbesetLocationHg19 (93)
hugene10sttranscriptcluster.db (1015)
hugene11sttranscriptcluster.db (253)
hugene20sttranscriptcluster.db (401)
hugene21sttranscriptcluster.db (246)
illuminaHumanDASLBeadID.db (12)
IlluminaHumanMethylation27k.db (151)
IlluminaHumanMethylation27kanno.ilmn12.hg19 (174)
IlluminaHumanMethylation27kmanifest (114)
IlluminaHumanMethylation450k.db (76)
IlluminaHumanMethylation450kanno.ilmn12.hg19 (2228)
IlluminaHumanMethylation450kannotation.ilmn.v1.2 (8)
IlluminaHumanMethylation450kmanifest (1491)
IlluminaHumanMethylation450kprobe (98)
IlluminaHumanMethylationEPICanno.ilm10b2.hg19 (389)
IlluminaHumanMethylationEPICanno.ilm10b3.hg19 (58)
IlluminaHumanMethylationEPICanno.ilm10b4.hg19 (1515)
IlluminaHumanMethylationEPICmanifest (1331)
IlluminaHumanMethylationEPICv2anno.20a1.hg38 (981)
IlluminaHumanMethylationEPICv2manifest (925)
IlluminaHumanMethylationMSAanno.ilm10a1.hg38 (49)
MafDb.1Kgenomes.phase1.GRCh38 (76)
MafDb.1Kgenomes.phase1.hs37d5 (104)
MafDb.1Kgenomes.phase3.GRCh38 (94)
MafDb.1Kgenomes.phase3.hs37d5 (105)
MafDb.ALL.wgs.phase1.release.v3.20101123 (38)
MafDb.ALL.wgs.phase3.release.v5a.20130502 (4)
MafDb.ALL.wgs.phase3.release.v5b.20130502 (4)
MafDb.ESP6500SI.V2.SSA137 (15)
MafDb.ESP6500SI.V2.SSA137.dbSNP138 (14)
MafDb.ESP6500SI.V2.SSA137.GRCh38 (17)
MafDb.ESP6500SI.V2.SSA137.hs37d5 (16)
MafDb.ExAC.r0.3.1.nonTCGA.snvs.hs37d5 (6)
MafDb.ExAC.r0.3.1.snvs.hs37d5 (6)
MafDb.ExAC.r1.0.nonTCGA.GRCh38 (69)
MafDb.ExAC.r1.0.nonTCGA.hs37d5 (108)
MafDb.gnomAD.r2.0.1.GRCh38 (13)
MafDb.gnomAD.r2.0.1.hs37d5 (9)
MafDb.gnomADex.r2.0.1.GRCh38 (12)
MafDb.gnomADex.r2.0.1.hs37d5 (21)
MafDb.gnomADex.r2.1.GRCh38 (72)
MafDb.gnomADex.r2.1.hs37d5 (73)
MafDb.TOPMed.freeze5.hg19 (77)
MafDb.TOPMed.freeze5.hg38 (74)
MafH5.gnomAD.v3.1.1.GRCh38 (11)
MafH5.gnomAD.v3.1.2.GRCh38 (14)
mamurhesusmamuentrezgprobe (2)
Masks.Dmelanogaster.UCSC.dm3 (6)
MeSH.Eco.K12.MG1655.eg.db (24)
MeSH.Eco.O127.H6.E2348.69.eg.db (5)
MeSH.Eco.O157.H7.EDL933.eg.db (7)
MeSH.Eco.O157.H7.Sakai.eg.db (20)
MmAgilentDesign026655.db (132)
moex10sttranscriptcluster.db (156)
MoExExonProbesetLocation (132)
mogene10sttranscriptcluster.db (285)
mogene11sttranscriptcluster.db (158)
mogene20sttranscriptcluster.db (222)
mogene21sttranscriptcluster.db (152)
mta10sttranscriptcluster.db (17)
org.MeSH.Eco.K12.DH10B.db (14)
org.MeSH.Eco.K12.MG1655.db (17)
org.MeSH.Eco.O103.H2.12009.db (13)
org.MeSH.Eco.O111.H.11128.db (15)
org.MeSH.Eco.O127.H6.E2348.69.db (15)
org.MeSH.Eco.O157.H7.EC4115.db (15)
org.MeSH.Eco.O157.H7.EDL933.db (16)
org.MeSH.Eco.O157.H7.Sakai.db (18)
org.MeSH.Eco.O157.H7.TW14359.db (13)
org.MeSH.Eco.O26.H11.11368.db (12)
pd.081229.hg18.promoter.medip.hx1 (116)
pd.2006.07.18.hg18.refseq.promoter (164)
pd.2006.07.18.mm8.refseq.promoter (126)
raex10sttranscriptcluster.db (82)
RaExExonProbesetLocation (126)
ragene10sttranscriptcluster.db (132)
ragene11sttranscriptcluster.db (145)
ragene20sttranscriptcluster.db (117)
ragene21sttranscriptcluster.db (114)
SNPlocs.Hsapiens.dbSNP.20071016 (11)
SNPlocs.Hsapiens.dbSNP.20080617 (11)
SNPlocs.Hsapiens.dbSNP.20090506 (50)
SNPlocs.Hsapiens.dbSNP.20100427 (54)
SNPlocs.Hsapiens.dbSNP.20101109 (342)
SNPlocs.Hsapiens.dbSNP.20110815 (54)
SNPlocs.Hsapiens.dbSNP.20111119 (43)
SNPlocs.Hsapiens.dbSNP.20120608 (72)
SNPlocs.Hsapiens.dbSNP141.GRCh38 (35)
SNPlocs.Hsapiens.dbSNP142.GRCh37 (65)
SNPlocs.Hsapiens.dbSNP144.GRCh37 (454)
SNPlocs.Hsapiens.dbSNP144.GRCh38 (584)
TxDb.Athaliana.BioMart.plantsmart10 (29)
TxDb.Athaliana.BioMart.plantsmart12 (33)
TxDb.Athaliana.BioMart.plantsmart14 (23)
TxDb.Athaliana.BioMart.plantsmart16 (22)
TxDb.Athaliana.BioMart.plantsmart19 (12)
TxDb.Athaliana.BioMart.plantsmart21 (9)
TxDb.Athaliana.BioMart.plantsmart22 (627)
TxDb.Athaliana.BioMart.plantsmart25 (102)
TxDb.Athaliana.BioMart.plantsmart28 (209)
TxDb.Athaliana.BioMart.plantsmart51 (82)
TxDb.Celegans.UCSC.ce11.ensGene (459)
TxDb.Celegans.UCSC.ce11.refGene (131)
TxDb.Celegans.UCSC.ce6.ensGene (335)
TxDb.Cfamiliaris.UCSC.canFam3.refGene (79)
TxDb.Cfamiliaris.UCSC.canFam4.refGene (57)
TxDb.Cfamiliaris.UCSC.canFam5.refGene (51)
TxDb.Cfamiliaris.UCSC.canFam6.refGene (51)
TxDb.Dmelanogaster.UCSC.dm3.ensGene (1053)
TxDb.Dmelanogaster.UCSC.dm6.ensGene (273)
TxDb.Drerio.UCSC.danRer10.refGene (157)
TxDb.Drerio.UCSC.danRer11.refGene (117)
TxDb.Ggallus.UCSC.galGal4.refGene (85)
TxDb.Ggallus.UCSC.galGal5.refGene (108)
TxDb.Ggallus.UCSC.galGal6.refGene (77)
TxDb.Hsapiens.BioMart.igis (79)
TxDb.Hsapiens.UCSC.hg18.knownGene (776)
TxDb.Hsapiens.UCSC.hg19.knownGene (5834)
TxDb.Hsapiens.UCSC.hg19.lincRNAsTranscripts (486)
TxDb.Hsapiens.UCSC.hg19.refGene (62)
TxDb.Hsapiens.UCSC.hg38.knownGene (3695)
TxDb.Mmulatta.UCSC.rheMac3.refGene (80)
TxDb.Mmulatta.UCSC.rheMac8.refGene (83)
TxDb.Mmusculus.UCSC.mm10.ensGene (237)
TxDb.Mmusculus.UCSC.mm10.knownGene (2002)
TxDb.Mmusculus.UCSC.mm39.knownGene (265)
TxDb.Mmusculus.UCSC.mm39.refGene (161)
TxDb.Mmusculus.UCSC.mm9.knownGene (784)
TxDb.Ptroglodytes.UCSC.panTro4.refGene (79)
TxDb.Ptroglodytes.UCSC.panTro5.refGene (64)
TxDb.Ptroglodytes.UCSC.panTro6.refGene (63)
TxDb.Rnorvegicus.BioMart.igis (72)
TxDb.Rnorvegicus.UCSC.rn4.ensGene (315)
TxDb.Rnorvegicus.UCSC.rn5.refGene (387)
TxDb.Rnorvegicus.UCSC.rn6.ncbiRefSeq (50)
TxDb.Rnorvegicus.UCSC.rn6.refGene (191)
TxDb.Rnorvegicus.UCSC.rn7.refGene (95)
TxDb.Scerevisiae.UCSC.sacCer2.ensGene (2)
TxDb.Scerevisiae.UCSC.sacCer2.sgdGene (115)
TxDb.Scerevisiae.UCSC.sacCer3.sgdGene (248)